Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC097374.2-201ENST00000618617 1306 ntBASIC20.69■□□□□ 0.9
SLF1Q9BQI6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.69■□□□□ 0.9
SLF1Q9BQI6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.68■□□□□ 0.9
SLF1Q9BQI6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AL049840.3-201ENST00000602669 611 ntBASIC20.68■□□□□ 0.9
SLF1Q9BQI6 FAM215A-202ENST00000632077 792 ntBASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AF228730.7-201ENST00000641842 219 ntBASIC20.68■□□□□ 0.9
SLF1Q9BQI6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 AC243591.1-201ENST00000452967 1364 ntBASIC20.68■□□□□ 0.9
SLF1Q9BQI6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLF1Q9BQI6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 SLC25A1P1-201ENST00000528351 927 ntBASIC20.67■□□□□ 0.9
SLF1Q9BQI6 SART3-203ENST00000546611 1184 ntBASIC20.67■□□□□ 0.9
SLF1Q9BQI6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 AC021087.4-201ENST00000563761 564 ntBASIC20.67■□□□□ 0.9
SLF1Q9BQI6 AL671883.3-201ENST00000603274 991 ntBASIC20.67■□□□□ 0.9
SLF1Q9BQI6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLF1Q9BQI6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.66■□□□□ 0.9
SLF1Q9BQI6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 BICD1-207ENST00000551848 1962 ntBASIC20.66■□□□□ 0.9
SLF1Q9BQI6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SLF1Q9BQI6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms