Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE1Q99829 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 PCDHA12-202ENST00000613593 2588 ntBASIC17.82■□□□□ 0.44
CPNE1Q99829 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 RASA4DP-201ENST00000460726 1199 ntBASIC17.82■□□□□ 0.44
CPNE1Q99829 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE1Q99829 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE1Q99829 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE1Q99829 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE1Q99829 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CPNE1Q99829 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CPNE1Q99829 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CPNE1Q99829 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE1Q99829 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPNE1Q99829 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPNE1Q99829 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPNE1Q99829 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CPNE1Q99829 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE1Q99829 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.81■□□□□ 0.44
CPNE1Q99829 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CPNE1Q99829 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE1Q99829 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CPNE1Q99829 AL391807.1-203ENST00000604392 2365 ntBASIC17.81■□□□□ 0.44
CPNE1Q99829 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE1Q99829 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE1Q99829 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.8■□□□□ 0.44
CPNE1Q99829 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 AL136038.4-201ENST00000603606 1261 ntBASIC17.8■□□□□ 0.44
CPNE1Q99829 AC145285.6-201ENST00000604632 637 ntBASIC17.8■□□□□ 0.44
CPNE1Q99829 AD000864.1-201ENST00000624076 2295 ntBASIC17.8■□□□□ 0.44
CPNE1Q99829 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE1Q99829 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE1Q99829 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE1Q99829 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE1Q99829 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE1Q99829 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CPNE1Q99829 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPNE1Q99829 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE1Q99829 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms