Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 AC009947.2-201ENST00000444014 672 ntBASIC17.47■□□□□ 0.39
NPAS2Q99743 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NPAS2Q99743 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS2Q99743 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NPAS2Q99743 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS2Q99743 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
NPAS2Q99743 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NPAS2Q99743 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 GPAT2P1-201ENST00000444924 1672 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS2Q99743 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS2Q99743 AL023284.2-201ENST00000405850 579 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS2Q99743 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.46■□□□□ 0.39
NPAS2Q99743 AC087388.1-201ENST00000571370 1112 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.46■□□□□ 0.39
NPAS2Q99743 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NPAS2Q99743 CR769767.2-201ENST00000622735 460 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
NPAS2Q99743 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS2Q99743 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.46■□□□□ 0.39
NPAS2Q99743 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS2Q99743 AC034236.2-201ENST00000606662 1610 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS2Q99743 LINC00602-201ENST00000629776 2065 ntBASIC17.46■□□□□ 0.39
NPAS2Q99743 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPAS2Q99743 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPAS2Q99743 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NPAS2Q99743 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.45■□□□□ 0.38
NPAS2Q99743 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.45■□□□□ 0.38
NPAS2Q99743 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NPAS2Q99743 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NPAS2Q99743 AL355312.1-201ENST00000407115 2176 ntBASIC17.45■□□□□ 0.38
NPAS2Q99743 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS2Q99743 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS2Q99743 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS2Q99743 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPAS2Q99743 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms