Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.42■□□□□ 0.54
CDCA3Q99618 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.42■□□□□ 0.54
CDCA3Q99618 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 COX20P2-201ENST00000452636 358 ntBASIC18.42■□□□□ 0.54
CDCA3Q99618 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.42■□□□□ 0.54
CDCA3Q99618 HLA-J-203ENST00000494367 1087 ntBASIC18.42■□□□□ 0.54
CDCA3Q99618 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.42■□□□□ 0.54
CDCA3Q99618 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA3Q99618 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA3Q99618 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA3Q99618 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CDCA3Q99618 REXO1L3P-201ENST00000622202 1288 ntBASIC18.42■□□□□ 0.54
CDCA3Q99618 AC105339.1-204ENST00000636249 355 ntBASIC18.42■□□□□ 0.54
CDCA3Q99618 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.42■□□□□ 0.54
CDCA3Q99618 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDCA3Q99618 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDCA3Q99618 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
CDCA3Q99618 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 AC009336.1-201ENST00000608941 1553 ntBASIC18.42■□□□□ 0.54
CDCA3Q99618 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDCA3Q99618 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDCA3Q99618 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.41■□□□□ 0.54
CDCA3Q99618 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.41■□□□□ 0.54
CDCA3Q99618 LINC00982-205ENST00000420957 435 ntBASIC18.41■□□□□ 0.54
CDCA3Q99618 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.41■□□□□ 0.54
CDCA3Q99618 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.41■□□□□ 0.54
CDCA3Q99618 AC068137.2-201ENST00000605408 478 ntBASIC18.41■□□□□ 0.54
CDCA3Q99618 AC092902.6-201ENST00000641783 218 ntBASIC18.41■□□□□ 0.54
CDCA3Q99618 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDCA3Q99618 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDCA3Q99618 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 AL121761.2-201ENST00000598007 1648 ntBASIC18.41■□□□□ 0.54
CDCA3Q99618 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA3Q99618 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
CDCA3Q99618 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.41■□□□□ 0.54
CDCA3Q99618 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.4■□□□□ 0.54
CDCA3Q99618 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 AC004461.1-201ENST00000412461 403 ntBASIC18.4■□□□□ 0.54
CDCA3Q99618 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.4■□□□□ 0.54
CDCA3Q99618 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.4■□□□□ 0.54
CDCA3Q99618 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.4■□□□□ 0.54
CDCA3Q99618 CXCL1P1-201ENST00000502804 216 ntBASIC18.4■□□□□ 0.54
CDCA3Q99618 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.4■□□□□ 0.54
CDCA3Q99618 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.4■□□□□ 0.54
CDCA3Q99618 AC239800.4-201ENST00000603712 296 ntBASIC18.4■□□□□ 0.54
CDCA3Q99618 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.4■□□□□ 0.54
CDCA3Q99618 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.4■□□□□ 0.54
CDCA3Q99618 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDCA3Q99618 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.4■□□□□ 0.54
CDCA3Q99618 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDCA3Q99618 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDCA3Q99618 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDCA3Q99618 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.39■□□□□ 0.54
CDCA3Q99618 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDCA3Q99618 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDCA3Q99618 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CDCA3Q99618 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDCA3Q99618 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDCA3Q99618 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 MYCLP1-201ENST00000372451 1075 ntBASIC18.39■□□□□ 0.53
CDCA3Q99618 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.39■□□□□ 0.53
CDCA3Q99618 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.39■□□□□ 0.53
CDCA3Q99618 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.39■□□□□ 0.53
CDCA3Q99618 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDCA3Q99618 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.39■□□□□ 0.53
CDCA3Q99618 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CDCA3Q99618 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms