Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 MTCL1P1-201ENST00000446207 792 ntBASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 AC133963.1-201ENST00000504166 1679 ntBASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 AC068472.1-201ENST00000474589 881 ntBASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 AL049597.2-201ENST00000565575 961 ntBASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A4EQ96PG1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 AL136038.3-201ENST00000561909 1096 ntBASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 LINC00304-203ENST00000565008 1864 ntBASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MS4A4EQ96PG1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms