Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 VN2R19P-201ENST00000442399 1052 ntBASIC18.91■□□□□ 0.62
CASD1Q96PB1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 AC092865.6-201ENST00000642101 219 ntBASIC18.91■□□□□ 0.62
CASD1Q96PB1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
CASD1Q96PB1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASD1Q96PB1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 BX276092.7-203ENST00000637198 1536 ntBASIC18.9■□□□□ 0.62
CASD1Q96PB1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 DDX43P3-201ENST00000441064 443 ntBASIC18.9■□□□□ 0.62
CASD1Q96PB1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 HCG4B-203ENST00000450128 991 ntBASIC18.9■□□□□ 0.62
CASD1Q96PB1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 STK19B-204ENST00000512515 211 ntBASIC18.9■□□□□ 0.62
CASD1Q96PB1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 MIR4751-201ENST00000578027 74 ntBASIC18.9■□□□□ 0.62
CASD1Q96PB1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 AC079781.4-201ENST00000641908 219 ntBASIC18.9■□□□□ 0.62
CASD1Q96PB1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASD1Q96PB1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.9■□□□□ 0.62
CASD1Q96PB1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.89■□□□□ 0.62
CASD1Q96PB1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.89■□□□□ 0.62
CASD1Q96PB1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CASD1Q96PB1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.89■□□□□ 0.62
CASD1Q96PB1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CASD1Q96PB1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 PMS2P2-201ENST00000425039 1128 ntBASIC18.89■□□□□ 0.61
CASD1Q96PB1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 PRSS29P-201ENST00000440800 595 ntBASIC18.89■□□□□ 0.61
CASD1Q96PB1 DNAJB3-202ENST00000449667 1266 ntBASIC18.89■□□□□ 0.61
CASD1Q96PB1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 AC004790.2-201ENST00000623588 572 ntBASIC18.89■□□□□ 0.61
CASD1Q96PB1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.89■□□□□ 0.61
CASD1Q96PB1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASD1Q96PB1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.88■□□□□ 0.61
CASD1Q96PB1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASD1Q96PB1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CASD1Q96PB1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms