Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 AC092720.2-201ENST00000602388 1665 ntBASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 AC125634.1-201ENST00000438758 1403 ntBASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 RCC2P3-201ENST00000418112 1537 ntBASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 MIR943-201ENST00000401286 94 ntBASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 AC009237.14-201ENST00000609975 1594 ntBASIC16.98■□□□□ 0.31
CNTNAP3BQ96NU0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 U91328.1-201ENST00000437528 223 ntBASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 AC022145.2-201ENST00000598203 171 ntBASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 AC004877.2-201ENST00000623941 599 ntBASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3BQ96NU0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 RPS2P32-201ENST00000439199 892 ntBASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 AC068472.1-201ENST00000474589 881 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms