Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 AC132938.6-201ENST00000623828 1655 ntBASIC18.37■□□□□ 0.53
C9orf72Q96LT7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
C9orf72Q96LT7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 AC117947.1-201ENST00000427448 529 ntBASIC18.36■□□□□ 0.53
C9orf72Q96LT7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 WWOX-216ENST00000569818 525 ntBASIC18.36■□□□□ 0.53
C9orf72Q96LT7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.36■□□□□ 0.53
C9orf72Q96LT7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 CROCCP2-202ENST00000412962 2773 ntBASIC18.35■□□□□ 0.53
C9orf72Q96LT7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 AC139887.4-201ENST00000607877 719 ntBASIC18.35■□□□□ 0.53
C9orf72Q96LT7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 AC141257.4-201ENST00000634557 245 ntBASIC18.35■□□□□ 0.53
C9orf72Q96LT7 AC136944.6-201ENST00000634818 245 ntBASIC18.35■□□□□ 0.53
C9orf72Q96LT7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf72Q96LT7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 COX11P1-201ENST00000489116 835 ntBASIC18.34■□□□□ 0.53
C9orf72Q96LT7 AC104390.1-201ENST00000555663 520 ntBASIC18.34■□□□□ 0.53
C9orf72Q96LT7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 AC124067.4-201ENST00000519691 2379 ntBASIC18.34■□□□□ 0.53
C9orf72Q96LT7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf72Q96LT7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 AC011676.5-201ENST00000624864 2660 ntBASIC18.33■□□□□ 0.53
C9orf72Q96LT7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf72Q96LT7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 NKILA-202ENST00000614771 2598 ntBASIC18.33■□□□□ 0.52
C9orf72Q96LT7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf72Q96LT7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms