Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM54Q969K7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM54Q969K7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM54Q969K7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM54Q969K7 AC010460.3-201ENST00000511359 1579 ntBASIC15.69■□□□□ 0.1
TMEM54Q969K7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TMEM54Q969K7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM54Q969K7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TMEM54Q969K7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM54Q969K7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM54Q969K7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM54Q969K7 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM54Q969K7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC007967.3-201ENST00000434308 558 ntBASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC091607.1-201ENST00000490318 1060 ntBASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AP002414.4-201ENST00000589764 1148 ntBASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC069148.1-201ENST00000608741 768 ntBASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM54Q969K7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM54Q969K7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AC233702.3-201ENST00000578656 1387 ntBASIC15.67■□□□□ 0.1
TMEM54Q969K7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AP005901.3-202ENST00000581653 237 ntBASIC15.67■□□□□ 0.1
TMEM54Q969K7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEM54Q969K7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM54Q969K7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM54Q969K7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TMEM54Q969K7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM54Q969K7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms