Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 AC093010.1-201ENST00000473625 1624 ntBASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 AP003041.3-201ENST00000527151 707 ntBASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 AL590326.2-201ENST00000625139 305 ntBASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 MIR564-202ENST00000385049 94 ntBASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40AQ8WXH6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40AQ8WXH6 AC104076.2-201ENST00000448912 469 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms