Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AC008687.6-201ENST00000596318 630 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
NUP35Q8NFH5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 DUTP2-201ENST00000519164 463 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AL356309.3-201ENST00000624132 1934 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 HYMAI-201ENST00000635591 3347 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 MST1L-201ENST00000442552 2185 ntBASIC13.32□□□□□ -0.28
NUP35Q8NFH5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms