Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AC008687.6-201ENST00000596318 630 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
NUP35Q8NFH5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 DUTP2-201ENST00000519164 463 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 AL356309.3-201ENST00000624132 1934 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 HYMAI-201ENST00000635591 3347 ntBASIC13.33□□□□□ -0.28
NUP35Q8NFH5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.33□□□□□ -0.28
NUP35Q8NFH5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 MST1L-201ENST00000442552 2185 ntBASIC13.32□□□□□ -0.28
NUP35Q8NFH5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NUP35Q8NFH5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms