Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 COX5BP2-201ENST00000392354 334 ntBASIC19.59■□□□□ 0.73
NME8Q8N427 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.59■□□□□ 0.73
NME8Q8N427 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.59■□□□□ 0.73
NME8Q8N427 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.59■□□□□ 0.73
NME8Q8N427 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.59■□□□□ 0.73
NME8Q8N427 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.59■□□□□ 0.73
NME8Q8N427 AC025062.2-201ENST00000605477 670 ntBASIC19.59■□□□□ 0.73
NME8Q8N427 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NME8Q8N427 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NME8Q8N427 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NME8Q8N427 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NME8Q8N427 ZNF259P1-201ENST00000407656 1365 ntBASIC19.58■□□□□ 0.73
NME8Q8N427 HLA-J-201ENST00000462773 1622 ntBASIC19.58■□□□□ 0.73
NME8Q8N427 KRT8P47-201ENST00000604727 1398 ntBASIC19.58■□□□□ 0.73
NME8Q8N427 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NME8Q8N427 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.58■□□□□ 0.73
NME8Q8N427 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NME8Q8N427 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NME8Q8N427 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NME8Q8N427 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NME8Q8N427 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NME8Q8N427 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.58■□□□□ 0.72
NME8Q8N427 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NME8Q8N427 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.58■□□□□ 0.72
NME8Q8N427 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
NME8Q8N427 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 MTDHP4-201ENST00000600287 670 ntBASIC19.58■□□□□ 0.72
NME8Q8N427 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NME8Q8N427 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.58■□□□□ 0.72
NME8Q8N427 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
NME8Q8N427 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.58■□□□□ 0.72
NME8Q8N427 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NME8Q8N427 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.58■□□□□ 0.72
NME8Q8N427 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NME8Q8N427 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.57■□□□□ 0.72
NME8Q8N427 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NME8Q8N427 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NME8Q8N427 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 PRYP5-201ENST00000451909 266 ntBASIC19.57■□□□□ 0.72
NME8Q8N427 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.57■□□□□ 0.72
NME8Q8N427 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.57■□□□□ 0.72
NME8Q8N427 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.57■□□□□ 0.72
NME8Q8N427 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.57■□□□□ 0.72
NME8Q8N427 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.57■□□□□ 0.72
NME8Q8N427 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.57■□□□□ 0.72
NME8Q8N427 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 GPALPP1-207ENST00000611650 899 ntBASIC19.57■□□□□ 0.72
NME8Q8N427 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
NME8Q8N427 AC079776.2-201ENST00000641154 1609 ntBASIC19.57■□□□□ 0.72
NME8Q8N427 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NME8Q8N427 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NME8Q8N427 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.57■□□□□ 0.72
NME8Q8N427 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NME8Q8N427 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NME8Q8N427 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NME8Q8N427 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NME8Q8N427 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NME8Q8N427 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.56■□□□□ 0.72
NME8Q8N427 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.56■□□□□ 0.72
NME8Q8N427 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.56■□□□□ 0.72
NME8Q8N427 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NME8Q8N427 IGHV3-22-201ENST00000520721 359 ntBASIC19.56■□□□□ 0.72
NME8Q8N427 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NME8Q8N427 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.56■□□□□ 0.72
NME8Q8N427 AC145285.3-201ENST00000564603 959 ntBASIC19.56■□□□□ 0.72
NME8Q8N427 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.56■□□□□ 0.72
NME8Q8N427 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.56■□□□□ 0.72
NME8Q8N427 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
NME8Q8N427 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms