Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 AL031133.1-201ENST00000406807 723 ntBASIC17.23■□□□□ 0.35
KRT78Q8N1N4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 GUSBP12-201ENST00000513727 720 ntBASIC17.23■□□□□ 0.35
KRT78Q8N1N4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 AC134043.2-201ENST00000624206 2238 ntBASIC17.23■□□□□ 0.35
KRT78Q8N1N4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 TSPY22P-201ENST00000427496 604 ntBASIC17.22■□□□□ 0.35
KRT78Q8N1N4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 AC112698.1-201ENST00000510299 916 ntBASIC17.22■□□□□ 0.35
KRT78Q8N1N4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 AC087388.1-201ENST00000571370 1112 ntBASIC17.22■□□□□ 0.35
KRT78Q8N1N4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 AC100803.2-201ENST00000562459 1963 ntBASIC17.22■□□□□ 0.35
KRT78Q8N1N4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT78Q8N1N4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 AC011498.5-201ENST00000592027 486 ntBASIC17.21■□□□□ 0.35
KRT78Q8N1N4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
KRT78Q8N1N4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KRT78Q8N1N4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT78Q8N1N4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT78Q8N1N4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT78Q8N1N4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms