Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ABCA6Q8N139 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 AC005332.7-201ENST00000614046 2005 ntBASIC26.15■■□□□ 1.78
ABCA6Q8N139 AC097637.2-201ENST00000624096 1997 ntBASIC26.15■■□□□ 1.78
ABCA6Q8N139 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 DUTP2-201ENST00000519164 463 ntBASIC26.15■■□□□ 1.78
ABCA6Q8N139 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.15■■□□□ 1.78
ABCA6Q8N139 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 AL590787.1-201ENST00000568856 1315 ntBASIC26.15■■□□□ 1.78
ABCA6Q8N139 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA6Q8N139 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA6Q8N139 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.14■■□□□ 1.78
ABCA6Q8N139 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA6Q8N139 AC005034.1-201ENST00000426657 489 ntBASIC26.14■■□□□ 1.78
ABCA6Q8N139 TIMM8BP1-201ENST00000452384 211 ntBASIC26.14■■□□□ 1.78
ABCA6Q8N139 KRT8P48-201ENST00000515599 1220 ntBASIC26.14■■□□□ 1.78
ABCA6Q8N139 POLD4-211ENST00000539074 714 ntTSL 3 BASIC26.14■■□□□ 1.78
ABCA6Q8N139 AC190387.1-201ENST00000551683 408 ntBASIC26.14■■□□□ 1.78
ABCA6Q8N139 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC26.14■■□□□ 1.78
ABCA6Q8N139 HFE2-206ENST00000634927 506 ntTSL 4 BASIC26.14■■□□□ 1.78
ABCA6Q8N139 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC26.14■■□□□ 1.78
ABCA6Q8N139 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA6Q8N139 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA6Q8N139 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC26.14■■□□□ 1.78
ABCA6Q8N139 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ABCA6Q8N139 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.14■■□□□ 1.77
ABCA6Q8N139 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC26.14■■□□□ 1.77
ABCA6Q8N139 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 DUX4L27-201ENST00000554796 1261 ntBASIC26.14■■□□□ 1.77
ABCA6Q8N139 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
ABCA6Q8N139 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ABCA6Q8N139 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 AC007274.1-201ENST00000439805 662 ntBASIC26.13■■□□□ 1.77
ABCA6Q8N139 AC002472.2-201ENST00000442739 958 ntBASIC26.13■■□□□ 1.77
ABCA6Q8N139 UGT1A2P-201ENST00000454886 866 ntBASIC26.13■■□□□ 1.77
ABCA6Q8N139 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC26.13■■□□□ 1.77
ABCA6Q8N139 VPS29-207ENST00000549970 818 ntTSL 3 BASIC26.13■■□□□ 1.77
ABCA6Q8N139 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.13■■□□□ 1.77
ABCA6Q8N139 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC26.13■■□□□ 1.77
ABCA6Q8N139 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
ABCA6Q8N139 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.13■■□□□ 1.77
ABCA6Q8N139 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
ABCA6Q8N139 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA6Q8N139 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA6Q8N139 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA6Q8N139 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 GPS2P2-201ENST00000430745 888 ntBASIC26.12■■□□□ 1.77
ABCA6Q8N139 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 AC112191.1-201ENST00000523689 701 ntBASIC26.12■■□□□ 1.77
ABCA6Q8N139 AC005225.4-201ENST00000557330 545 ntBASIC26.12■■□□□ 1.77
ABCA6Q8N139 DUT-210ENST00000559935 569 ntTSL 3 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC26.12■■□□□ 1.77
ABCA6Q8N139 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCA6Q8N139 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 KRT18P32-201ENST00000424695 1287 ntBASIC26.11■■□□□ 1.77
ABCA6Q8N139 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms