Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 AC069148.1-201ENST00000608741 768 ntBASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 AC006116.8-202ENST00000587620 1550 ntBASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB11FIP4Q86YS3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 MIR3180-1-201ENST00000580374 94 ntBASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 MIR3180-3-201ENST00000584616 94 ntBASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 NPAP1P7-201ENST00000613027 823 ntBASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RAB11FIP4Q86YS3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 TPSP2-201ENST00000561760 610 ntBASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 AC005336.2-201ENST00000593183 939 ntBASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB11FIP4Q86YS3 AC090340.1-201ENST00000620778 4980 ntBASIC20.89■□□□□ 0.94
RAB11FIP4Q86YS3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB11FIP4Q86YS3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB11FIP4Q86YS3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 AC022898.2-201ENST00000616822 1312 ntBASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 LINC00265-3P-201ENST00000447588 903 ntBASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 TOB2P1-201ENST00000469761 992 ntBASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 AC090616.6-201ENST00000582640 721 ntBASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RAB11FIP4Q86YS3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms