Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.16■■□□□ 1.14
UBE3BQ7Z3V4 AL049757.1-201ENST00000616842 1596 ntBASIC22.16■■□□□ 1.14
UBE3BQ7Z3V4 FLJ13224-201ENST00000313737 1514 ntBASIC22.16■■□□□ 1.14
UBE3BQ7Z3V4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 AC093909.1-201ENST00000504731 1122 ntBASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 AC012640.2-201ENST00000561606 901 ntBASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 AC116407.2-201ENST00000613639 860 ntBASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 AF228730.7-201ENST00000641842 219 ntBASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBE3BQ7Z3V4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
UBE3BQ7Z3V4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.14■■□□□ 1.14
UBE3BQ7Z3V4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.14■■□□□ 1.14
UBE3BQ7Z3V4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
UBE3BQ7Z3V4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.14■■□□□ 1.14
UBE3BQ7Z3V4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.14■■□□□ 1.14
UBE3BQ7Z3V4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 OR7E14P-202ENST00000530490 1290 ntBASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AL671883.3-201ENST00000603274 991 ntBASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AC019129.2-201ENST00000609837 1235 ntBASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AC073592.4-201ENST00000623827 446 ntBASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AC116407.3-201ENST00000623905 1129 ntBASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AC073592.5-201ENST00000624854 528 ntBASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.14■■□□□ 1.13
UBE3BQ7Z3V4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 SPDYE21P-201ENST00000413323 827 ntBASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 AL353593.2-201ENST00000602529 1483 ntBASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 ABALON-201ENST00000629058 1903 ntBASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 AC138028.4-201ENST00000564984 1845 ntBASIC22.13■■□□□ 1.13
UBE3BQ7Z3V4 AC132938.5-201ENST00000624980 1813 ntBASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms