Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT40Q6A162 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT40Q6A162 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT40Q6A162 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT40Q6A162 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT40Q6A162 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
KRT40Q6A162 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
KRT40Q6A162 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KRT40Q6A162 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.64■□□□□ 0.9
KRT40Q6A162 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.64■□□□□ 0.9
KRT40Q6A162 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT40Q6A162 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
KRT40Q6A162 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 AL355312.1-201ENST00000407115 2176 ntBASIC20.64■□□□□ 0.89
KRT40Q6A162 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.64■□□□□ 0.89
KRT40Q6A162 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT40Q6A162 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT40Q6A162 AC068472.1-201ENST00000474589 881 ntBASIC20.64■□□□□ 0.89
KRT40Q6A162 AC112698.1-201ENST00000510299 916 ntBASIC20.64■□□□□ 0.89
KRT40Q6A162 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.64■□□□□ 0.89
KRT40Q6A162 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT40Q6A162 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT40Q6A162 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
KRT40Q6A162 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT40Q6A162 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT40Q6A162 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
KRT40Q6A162 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
KRT40Q6A162 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KRT40Q6A162 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT40Q6A162 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KRT40Q6A162 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT40Q6A162 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 AC004870.1-201ENST00000315132 882 ntBASIC20.63■□□□□ 0.89
KRT40Q6A162 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 AL645929.1-201ENST00000420084 975 ntBASIC20.63■□□□□ 0.89
KRT40Q6A162 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT40Q6A162 AC009078.2-202ENST00000463353 338 ntBASIC20.63■□□□□ 0.89
KRT40Q6A162 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
KRT40Q6A162 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT40Q6A162 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT40Q6A162 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT40Q6A162 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KRT40Q6A162 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KRT40Q6A162 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 KRT17P6-201ENST00000453795 1220 ntBASIC20.62■□□□□ 0.89
KRT40Q6A162 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.62■□□□□ 0.89
KRT40Q6A162 AC092329.2-201ENST00000598402 547 ntBASIC20.62■□□□□ 0.89
KRT40Q6A162 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT40Q6A162 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
KRT40Q6A162 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT40Q6A162 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT40Q6A162 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT40Q6A162 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KRT40Q6A162 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT40Q6A162 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KRT40Q6A162 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT40Q6A162 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT40Q6A162 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms