Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC00242Q5T6M2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 AC106886.4-201ENST00000623557 2502 ntBASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 AP003041.3-201ENST00000527151 707 ntBASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LINC00242Q5T6M2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 REXO1L11P-201ENST00000620964 1927 ntBASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC00242Q5T6M2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms