Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AC246785.2-201ENST00000432512 513 ntBASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 DRAXINP1-201ENST00000437611 948 ntBASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AL138831.2-201ENST00000606564 490 ntBASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AC069148.1-201ENST00000608741 768 ntBASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 AC097374.2-201ENST00000618617 1306 ntBASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 AC133963.1-201ENST00000504166 1679 ntBASIC18.73■□□□□ 0.59
PTPN20Q4JDL3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PTPN20Q4JDL3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 AC233702.3-201ENST00000578656 1387 ntBASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 BX276092.7-203ENST00000637198 1536 ntBASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 TOB2P1-201ENST00000469761 992 ntBASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTPN20Q4JDL3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms