Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.96■□□□□ 0.15
CLRN1P58418 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.96■□□□□ 0.15
CLRN1P58418 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.96■□□□□ 0.15
CLRN1P58418 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.96■□□□□ 0.15
CLRN1P58418 VENTXP5-201ENST00000523979 775 ntBASIC15.96■□□□□ 0.15
CLRN1P58418 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.96■□□□□ 0.15
CLRN1P58418 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.96■□□□□ 0.15
CLRN1P58418 GPR32P1-201ENST00000601788 811 ntBASIC15.96■□□□□ 0.15
CLRN1P58418 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLRN1P58418 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLRN1P58418 AC100803.2-201ENST00000562459 1963 ntBASIC15.96■□□□□ 0.15
CLRN1P58418 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLRN1P58418 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLRN1P58418 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLRN1P58418 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.96■□□□□ 0.15
CLRN1P58418 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLRN1P58418 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLRN1P58418 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.96■□□□□ 0.14
CLRN1P58418 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLRN1P58418 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
CLRN1P58418 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CLRN1P58418 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 NFIC-211ENST00000641145 8399 ntBASIC15.95■□□□□ 0.14
CLRN1P58418 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.95■□□□□ 0.14
CLRN1P58418 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.95■□□□□ 0.14
CLRN1P58418 AL671277.2-201ENST00000458060 996 ntBASIC15.95■□□□□ 0.14
CLRN1P58418 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.95■□□□□ 0.14
CLRN1P58418 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.95■□□□□ 0.14
CLRN1P58418 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.95■□□□□ 0.14
CLRN1P58418 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.95■□□□□ 0.14
CLRN1P58418 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.95■□□□□ 0.14
CLRN1P58418 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.95■□□□□ 0.14
CLRN1P58418 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.95■□□□□ 0.14
CLRN1P58418 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLRN1P58418 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.95■□□□□ 0.14
CLRN1P58418 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.95■□□□□ 0.14
CLRN1P58418 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLRN1P58418 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLRN1P58418 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLRN1P58418 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 AC026471.1-201ENST00000564629 3026 ntBASIC15.94■□□□□ 0.14
CLRN1P58418 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.94■□□□□ 0.14
CLRN1P58418 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.94■□□□□ 0.14
CLRN1P58418 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CLRN1P58418 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.94■□□□□ 0.14
CLRN1P58418 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.94■□□□□ 0.14
CLRN1P58418 HYMAI.1-201ENST00000620949 238 ntBASIC15.94■□□□□ 0.14
CLRN1P58418 AC009154.2-201ENST00000621177 724 ntBASIC15.94■□□□□ 0.14
CLRN1P58418 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLRN1P58418 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.94■□□□□ 0.14
CLRN1P58418 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CLRN1P58418 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLRN1P58418 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLRN1P58418 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLRN1P58418 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms