Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EPHB4P54760 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EPHB4P54760 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 KRT18P3-201ENST00000451602 1288 ntBASIC20.02■□□□□ 0.8
EPHB4P54760 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHB4P54760 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.02■□□□□ 0.8
EPHB4P54760 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.02■□□□□ 0.8
EPHB4P54760 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.02■□□□□ 0.8
EPHB4P54760 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHB4P54760 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.02■□□□□ 0.8
EPHB4P54760 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHB4P54760 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EPHB4P54760 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
EPHB4P54760 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
EPHB4P54760 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EPHB4P54760 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EPHB4P54760 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.02■□□□□ 0.79
EPHB4P54760 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EPHB4P54760 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EPHB4P54760 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EPHB4P54760 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
EPHB4P54760 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHB4P54760 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHB4P54760 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHB4P54760 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.01■□□□□ 0.79
EPHB4P54760 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.01■□□□□ 0.79
EPHB4P54760 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.01■□□□□ 0.79
EPHB4P54760 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 AC092910.1-201ENST00000482027 1129 ntBASIC20.01■□□□□ 0.79
EPHB4P54760 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 SART3-203ENST00000546611 1184 ntBASIC20.01■□□□□ 0.79
EPHB4P54760 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
EPHB4P54760 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHB4P54760 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB4P54760 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHB4P54760 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
EPHB4P54760 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
EPHB4P54760 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
EPHB4P54760 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20■□□□□ 0.79
EPHB4P54760 RNA5SP415-201ENST00000517246 115 ntBASIC20■□□□□ 0.79
EPHB4P54760 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20■□□□□ 0.79
EPHB4P54760 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20■□□□□ 0.79
EPHB4P54760 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20■□□□□ 0.79
EPHB4P54760 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20■□□□□ 0.79
EPHB4P54760 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20■□□□□ 0.79
EPHB4P54760 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20■□□□□ 0.79
EPHB4P54760 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB4P54760 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB4P54760 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.99■□□□□ 0.79
EPHB4P54760 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.99■□□□□ 0.79
EPHB4P54760 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.99■□□□□ 0.79
EPHB4P54760 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB4P54760 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB4P54760 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.99■□□□□ 0.79
EPHB4P54760 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms