Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC010654.1-201ENST00000615722 808 ntBASIC19.57■□□□□ 0.72
ATN1P54259 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 AC025580.3-201ENST00000617932 1424 ntBASIC19.57■□□□□ 0.72
ATN1P54259 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATN1P54259 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATN1P54259 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ATN1P54259 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 MRPL20P1-201ENST00000400819 433 ntBASIC19.56■□□□□ 0.72
ATN1P54259 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.56■□□□□ 0.72
ATN1P54259 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 MIR4745-201ENST00000577608 62 ntBASIC19.56■□□□□ 0.72
ATN1P54259 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.56■□□□□ 0.72
ATN1P54259 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ATN1P54259 AC004835.2-201ENST00000603762 682 ntBASIC19.56■□□□□ 0.72
ATN1P54259 RN7SL832P-201ENST00000607781 1756 ntBASIC19.56■□□□□ 0.72
ATN1P54259 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.56■□□□□ 0.72
ATN1P54259 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATN1P54259 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.56■□□□□ 0.72
ATN1P54259 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 AC132938.5-201ENST00000624980 1813 ntBASIC19.55■□□□□ 0.72
ATN1P54259 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 AFG3L1P-217ENST00000557444 2447 ntBASIC19.55■□□□□ 0.72
ATN1P54259 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ATN1P54259 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.55■□□□□ 0.72
ATN1P54259 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.55■□□□□ 0.72
ATN1P54259 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.55■□□□□ 0.72
ATN1P54259 AC074386.1-202ENST00000463561 864 ntBASIC19.55■□□□□ 0.72
ATN1P54259 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 AC096734.2-201ENST00000562054 433 ntBASIC19.55■□□□□ 0.72
ATN1P54259 AC009712.1-201ENST00000564938 316 ntBASIC19.55■□□□□ 0.72
ATN1P54259 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.55■□□□□ 0.72
ATN1P54259 AC005498.2-205ENST00000593218 784 ntBASIC19.55■□□□□ 0.72
ATN1P54259 AC009948.4-201ENST00000604692 675 ntBASIC19.55■□□□□ 0.72
ATN1P54259 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 AC091812.2-201ENST00000619081 385 ntBASIC19.55■□□□□ 0.72
ATN1P54259 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATN1P54259 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.54■□□□□ 0.72
ATN1P54259 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ATN1P54259 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.54■□□□□ 0.72
ATN1P54259 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
ATN1P54259 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.54■□□□□ 0.72
ATN1P54259 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATN1P54259 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.54■□□□□ 0.72
ATN1P54259 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 ACTG1P14-201ENST00000446382 1122 ntBASIC19.54■□□□□ 0.72
ATN1P54259 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.54■□□□□ 0.72
ATN1P54259 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.54■□□□□ 0.72
ATN1P54259 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.54■□□□□ 0.72
ATN1P54259 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.54■□□□□ 0.72
ATN1P54259 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.54■□□□□ 0.72
ATN1P54259 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATN1P54259 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms