Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.98■□□□□ 0.47
LIMK2P53671 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.98■□□□□ 0.47
LIMK2P53671 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 MIR3917-201ENST00000580971 93 ntBASIC17.98■□□□□ 0.47
LIMK2P53671 CLEC4GP1-201ENST00000596555 870 ntBASIC17.98■□□□□ 0.47
LIMK2P53671 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 AC141586.5-201ENST00000624546 2050 ntBASIC17.98■□□□□ 0.47
LIMK2P53671 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LIMK2P53671 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.98■□□□□ 0.47
LIMK2P53671 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.98■□□□□ 0.47
LIMK2P53671 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LIMK2P53671 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LIMK2P53671 LINC00167-201ENST00000530583 1419 ntBASIC17.98■□□□□ 0.47
LIMK2P53671 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LIMK2P53671 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.97■□□□□ 0.47
LIMK2P53671 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LIMK2P53671 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.97■□□□□ 0.47
LIMK2P53671 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
LIMK2P53671 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LIMK2P53671 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LIMK2P53671 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LIMK2P53671 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LIMK2P53671 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LIMK2P53671 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
LIMK2P53671 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
LIMK2P53671 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LIMK2P53671 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.96■□□□□ 0.47
LIMK2P53671 AL450487.1-201ENST00000426799 995 ntBASIC17.96■□□□□ 0.47
LIMK2P53671 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.96■□□□□ 0.47
LIMK2P53671 NPAP1P7-201ENST00000613027 823 ntBASIC17.96■□□□□ 0.47
LIMK2P53671 AC079602.3-201ENST00000623931 403 ntBASIC17.96■□□□□ 0.47
LIMK2P53671 AL157888.1-201ENST00000631930 593 ntBASIC17.96■□□□□ 0.47
LIMK2P53671 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.96■□□□□ 0.47
LIMK2P53671 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LIMK2P53671 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
LIMK2P53671 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
LIMK2P53671 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.96■□□□□ 0.47
LIMK2P53671 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIMK2P53671 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LIMK2P53671 AC022898.2-201ENST00000616822 1312 ntBASIC17.96■□□□□ 0.46
LIMK2P53671 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LIMK2P53671 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.96■□□□□ 0.46
LIMK2P53671 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
LIMK2P53671 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.96■□□□□ 0.46
LIMK2P53671 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.96■□□□□ 0.46
LIMK2P53671 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
LIMK2P53671 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.95■□□□□ 0.46
LIMK2P53671 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
LIMK2P53671 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LIMK2P53671 HLA-F-220ENST00000434407 884 ntBASIC17.95■□□□□ 0.46
LIMK2P53671 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LIMK2P53671 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.95■□□□□ 0.46
LIMK2P53671 AC011498.5-201ENST00000592027 486 ntBASIC17.95■□□□□ 0.46
LIMK2P53671 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms