Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.52■□□□□ 0.39
GTF2A1P52655 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.52■□□□□ 0.39
GTF2A1P52655 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.52■□□□□ 0.39
GTF2A1P52655 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GTF2A1P52655 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
GTF2A1P52655 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GTF2A1P52655 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2A1P52655 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GTF2A1P52655 PGM5P4-201ENST00000421970 445 ntBASIC17.51■□□□□ 0.39
GTF2A1P52655 AC097381.1-201ENST00000429019 1296 ntBASIC17.51■□□□□ 0.39
GTF2A1P52655 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2A1P52655 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.51■□□□□ 0.39
GTF2A1P52655 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2A1P52655 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2A1P52655 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2A1P52655 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2A1P52655 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2A1P52655 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2A1P52655 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GTF2A1P52655 KRT8P17-201ENST00000453110 1448 ntBASIC17.5■□□□□ 0.39
GTF2A1P52655 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.5■□□□□ 0.39
GTF2A1P52655 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GTF2A1P52655 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2A1P52655 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2A1P52655 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2A1P52655 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2A1P52655 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2A1P52655 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GTF2A1P52655 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
GTF2A1P52655 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.49■□□□□ 0.39
GTF2A1P52655 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.49■□□□□ 0.39
GTF2A1P52655 AL139246.5-201ENST00000606645 996 ntBASIC17.49■□□□□ 0.39
GTF2A1P52655 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.49■□□□□ 0.39
GTF2A1P52655 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.49■□□□□ 0.39
GTF2A1P52655 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.49■□□□□ 0.39
GTF2A1P52655 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GTF2A1P52655 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 CYP21A1P-202ENST00000354927 1481 ntBASIC17.49■□□□□ 0.39
GTF2A1P52655 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GTF2A1P52655 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GTF2A1P52655 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 AC006116.8-202ENST00000587620 1550 ntBASIC17.49■□□□□ 0.39
GTF2A1P52655 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2A1P52655 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
GTF2A1P52655 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms