Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC1P51610 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.47■□□□□ 0.07
HCFC1P51610 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC1P51610 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC1P51610 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HCFC1P51610 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.47■□□□□ 0.07
HCFC1P51610 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HCFC1P51610 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HCFC1P51610 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.46■□□□□ 0.07
HCFC1P51610 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 ELK2BP-201ENST00000415014 1224 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 HCG4B-203ENST00000450128 991 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.46■□□□□ 0.07
HCFC1P51610 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.46■□□□□ 0.07
HCFC1P51610 AC064836.3-201ENST00000607928 673 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 AL596442.2-201ENST00000610240 980 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HCFC1P51610 AL022326.1-202ENST00000641533 845 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.46■□□□□ 0.07
HCFC1P51610 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCFC1P51610 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HCFC1P51610 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCFC1P51610 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCFC1P51610 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 AC103564.2-201ENST00000432853 1299 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.46■□□□□ 0.07
HCFC1P51610 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.46■□□□□ 0.07
HCFC1P51610 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.46■□□□□ 0.07
HCFC1P51610 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HCFC1P51610 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
HCFC1P51610 LINC02084-201ENST00000606069 1096 ntBASIC15.46■□□□□ 0.07
HCFC1P51610 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.46■□□□□ 0.07
HCFC1P51610 AC007613.1-201ENST00000572811 2597 ntBASIC15.46■□□□□ 0.06
HCFC1P51610 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCFC1P51610 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCFC1P51610 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.06
HCFC1P51610 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.46■□□□□ 0.06
HCFC1P51610 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
HCFC1P51610 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.46■□□□□ 0.06
HCFC1P51610 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.45■□□□□ 0.06
HCFC1P51610 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.45■□□□□ 0.06
HCFC1P51610 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.45■□□□□ 0.06
HCFC1P51610 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.45■□□□□ 0.06
HCFC1P51610 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.45■□□□□ 0.06
HCFC1P51610 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
HCFC1P51610 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.45■□□□□ 0.06
HCFC1P51610 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.45■□□□□ 0.06
HCFC1P51610 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
HCFC1P51610 AC027612.4-201ENST00000605371 583 ntBASIC15.45■□□□□ 0.06
HCFC1P51610 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.45■□□□□ 0.06
HCFC1P51610 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.45■□□□□ 0.06
HCFC1P51610 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HCFC1P51610 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCFC1P51610 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.45■□□□□ 0.06
HCFC1P51610 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCFC1P51610 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.44■□□□□ 0.06
HCFC1P51610 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.44■□□□□ 0.06
HCFC1P51610 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.44■□□□□ 0.06
HCFC1P51610 AC006504.4-201ENST00000592118 1568 ntBASIC15.44■□□□□ 0.06
HCFC1P51610 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCFC1P51610 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.44■□□□□ 0.06
HCFC1P51610 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCFC1P51610 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCFC1P51610 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms