Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC083849.1-201ENST00000615227 514 ntBASIC16.6■□□□□ 0.25
RNF144AP50876 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF144AP50876 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RNF144AP50876 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF144AP50876 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF144AP50876 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
RNF144AP50876 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF144AP50876 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF144AP50876 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF144AP50876 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 KRT18P48-201ENST00000434763 852 ntBASIC16.59■□□□□ 0.25
RNF144AP50876 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 HOMER2P1-201ENST00000455653 964 ntBASIC16.59■□□□□ 0.25
RNF144AP50876 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF144AP50876 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF144AP50876 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF144AP50876 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF144AP50876 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF144AP50876 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF144AP50876 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF144AP50876 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
RNF144AP50876 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF144AP50876 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF144AP50876 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF144AP50876 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
RNF144AP50876 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF144AP50876 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF144AP50876 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.58■□□□□ 0.24
RNF144AP50876 FAM8A6P-201ENST00000407496 1135 ntBASIC16.58■□□□□ 0.24
RNF144AP50876 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 AL671277.2-201ENST00000458060 996 ntBASIC16.58■□□□□ 0.24
RNF144AP50876 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF144AP50876 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF144AP50876 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF144AP50876 RNF126P1-202ENST00000569893 925 ntBASIC16.58■□□□□ 0.24
RNF144AP50876 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF144AP50876 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF144AP50876 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 SIRPAP1-201ENST00000448467 1770 ntBASIC16.58■□□□□ 0.24
RNF144AP50876 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
RNF144AP50876 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF144AP50876 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF144AP50876 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
RNF144AP50876 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 AP003733.1-201ENST00000491725 852 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms