Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.6■□□□□ 0.57
MTHFRP42898 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 AC254562.1-201ENST00000417586 456 ntBASIC18.6■□□□□ 0.57
MTHFRP42898 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.6■□□□□ 0.57
MTHFRP42898 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.6■□□□□ 0.57
MTHFRP42898 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.6■□□□□ 0.57
MTHFRP42898 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
MTHFRP42898 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.6■□□□□ 0.57
MTHFRP42898 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.6■□□□□ 0.57
MTHFRP42898 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.6■□□□□ 0.57
MTHFRP42898 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MTHFRP42898 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.6■□□□□ 0.57
MTHFRP42898 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MTHFRP42898 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.59■□□□□ 0.57
MTHFRP42898 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MTHFRP42898 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.59■□□□□ 0.57
MTHFRP42898 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 KRT18P2-201ENST00000447938 1258 ntBASIC18.59■□□□□ 0.57
MTHFRP42898 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.59■□□□□ 0.57
MTHFRP42898 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.59■□□□□ 0.57
MTHFRP42898 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.59■□□□□ 0.57
MTHFRP42898 MIR3197-201ENST00000582241 73 ntBASIC18.59■□□□□ 0.57
MTHFRP42898 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.59■□□□□ 0.57
MTHFRP42898 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.59■□□□□ 0.57
MTHFRP42898 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 AL161938.1-201ENST00000569833 2180 ntBASIC18.59■□□□□ 0.57
MTHFRP42898 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
MTHFRP42898 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MTHFRP42898 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
MTHFRP42898 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MTHFRP42898 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
MTHFRP42898 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
MTHFRP42898 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MTHFRP42898 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 CRYGEP-201ENST00000412192 528 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.58■□□□□ 0.56
MTHFRP42898 AC096633.1-201ENST00000422446 749 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.58■□□□□ 0.56
MTHFRP42898 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.58■□□□□ 0.56
MTHFRP42898 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 CYMP-203ENST00000474680 1263 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 RFPL4AP1-201ENST00000530883 850 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 MIR4469-201ENST00000583919 79 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 AL589182.2-201ENST00000619332 1049 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 AD001527.2-201ENST00000622994 785 ntBASIC18.58■□□□□ 0.56
MTHFRP42898 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
MTHFRP42898 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MTHFRP42898 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.58■□□□□ 0.56
MTHFRP42898 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MTHFRP42898 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MTHFRP42898 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MTHFRP42898 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
MTHFRP42898 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MTHFRP42898 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.57■□□□□ 0.56
MTHFRP42898 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
MTHFRP42898 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MTHFRP42898 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MTHFRP42898 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms