Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 FLJ38576-201ENST00000623820 2459 ntBASIC16.02■□□□□ 0.16
SOX6P35712 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SOX6P35712 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX6P35712 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX6P35712 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.02■□□□□ 0.16
SOX6P35712 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.02■□□□□ 0.16
SOX6P35712 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.02■□□□□ 0.15
SOX6P35712 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX6P35712 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.02■□□□□ 0.15
SOX6P35712 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX6P35712 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SOX6P35712 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.02■□□□□ 0.15
SOX6P35712 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SOX6P35712 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
SOX6P35712 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SOX6P35712 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 TSPY26P-202ENST00000565928 3884 ntBASIC16.01■□□□□ 0.15
SOX6P35712 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 RCC2P3-201ENST00000418112 1537 ntBASIC16.01■□□□□ 0.15
SOX6P35712 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.01■□□□□ 0.15
SOX6P35712 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.01■□□□□ 0.15
SOX6P35712 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.01■□□□□ 0.15
SOX6P35712 AC098934.4-201ENST00000564127 592 ntBASIC16.01■□□□□ 0.15
SOX6P35712 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.01■□□□□ 0.15
SOX6P35712 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.01■□□□□ 0.15
SOX6P35712 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SOX6P35712 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.01■□□□□ 0.15
SOX6P35712 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SOX6P35712 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
SOX6P35712 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SOX6P35712 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SOX6P35712 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16■□□□□ 0.15
SOX6P35712 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SOX6P35712 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SOX6P35712 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16■□□□□ 0.15
SOX6P35712 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SOX6P35712 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SOX6P35712 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16■□□□□ 0.15
SOX6P35712 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16■□□□□ 0.15
SOX6P35712 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SOX6P35712 MYC-209ENST00000641252 345 ntBASIC16■□□□□ 0.15
SOX6P35712 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16■□□□□ 0.15
SOX6P35712 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 AL513477.1-201ENST00000602865 2407 ntBASIC16■□□□□ 0.15
SOX6P35712 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SOX6P35712 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SOX6P35712 AC008741.2-201ENST00000612792 3115 ntBASIC16■□□□□ 0.15
SOX6P35712 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16■□□□□ 0.15
SOX6P35712 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
SOX6P35712 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SOX6P35712 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 KRT8P41-201ENST00000533985 1514 ntBASIC15.99■□□□□ 0.15
SOX6P35712 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SOX6P35712 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX6P35712 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms