Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.92■□□□□ 0.3
RORAP35398 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.92■□□□□ 0.3
RORAP35398 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.92■□□□□ 0.3
RORAP35398 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.92■□□□□ 0.3
RORAP35398 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RORAP35398 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.91■□□□□ 0.3
RORAP35398 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
RORAP35398 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RORAP35398 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.91■□□□□ 0.3
RORAP35398 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 AC079776.4-201ENST00000511039 504 ntBASIC16.91■□□□□ 0.3
RORAP35398 DUTP2-201ENST00000519164 463 ntBASIC16.91■□□□□ 0.3
RORAP35398 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.91■□□□□ 0.3
RORAP35398 AL773604.1-201ENST00000617417 272 ntBASIC16.91■□□□□ 0.3
RORAP35398 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.91■□□□□ 0.3
RORAP35398 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.91■□□□□ 0.3
RORAP35398 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RORAP35398 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RORAP35398 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RORAP35398 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.9■□□□□ 0.3
RORAP35398 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 AL022342.1-201ENST00000400363 863 ntBASIC16.9■□□□□ 0.3
RORAP35398 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.9■□□□□ 0.3
RORAP35398 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 MTDHP3-201ENST00000594186 672 ntBASIC16.9■□□□□ 0.3
RORAP35398 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.9■□□□□ 0.3
RORAP35398 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RORAP35398 AC093677.2-201ENST00000600169 1863 ntBASIC16.9■□□□□ 0.3
RORAP35398 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
RORAP35398 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RORAP35398 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 AC097374.2-201ENST00000618617 1306 ntBASIC16.9■□□□□ 0.3
RORAP35398 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RORAP35398 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RORAP35398 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.89■□□□□ 0.3
RORAP35398 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RORAP35398 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.89■□□□□ 0.29
RORAP35398 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.89■□□□□ 0.29
RORAP35398 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
RORAP35398 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms