Protein–RNA interactions for Protein: P29508

SERPINB3, Serpin B3, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINB3P29508 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SERPINB3P29508 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.76■□□□□ 0.43
SERPINB3P29508 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SERPINB3P29508 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SERPINB3P29508 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SERPINB3P29508 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.76■□□□□ 0.43
SERPINB3P29508 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.76■□□□□ 0.43
SERPINB3P29508 AC093010.1-201ENST00000473625 1624 ntBASIC17.76■□□□□ 0.43
SERPINB3P29508 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SERPINB3P29508 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.75■□□□□ 0.43
SERPINB3P29508 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.75■□□□□ 0.43
SERPINB3P29508 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.75■□□□□ 0.43
SERPINB3P29508 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SERPINB3P29508 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.75■□□□□ 0.43
SERPINB3P29508 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 AL138688.1-201ENST00000624851 1594 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.74■□□□□ 0.43
SERPINB3P29508 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.74■□□□□ 0.43
SERPINB3P29508 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SERPINB3P29508 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SERPINB3P29508 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.74■□□□□ 0.43
SERPINB3P29508 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 RBM17P1-201ENST00000453646 1190 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.74■□□□□ 0.43
SERPINB3P29508 BX088651.1-201ENST00000540551 451 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.74■□□□□ 0.43
SERPINB3P29508 AC073912.3-201ENST00000624414 853 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.74■□□□□ 0.43
SERPINB3P29508 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 AC009102.3-201ENST00000623118 1491 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.74■□□□□ 0.43
SERPINB3P29508 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.74■□□□□ 0.43
SERPINB3P29508 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SERPINB3P29508 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SERPINB3P29508 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SERPINB3P29508 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SERPINB3P29508 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.73■□□□□ 0.43
SERPINB3P29508 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms