Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNA3P22001 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.7■■□□□ 1.06
KCNA3P22001 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
KCNA3P22001 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
KCNA3P22001 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNA3P22001 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KCNA3P22001 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
KCNA3P22001 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.69■■□□□ 1.06
KCNA3P22001 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
KCNA3P22001 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.69■■□□□ 1.06
KCNA3P22001 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.69■■□□□ 1.06
KCNA3P22001 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.69■■□□□ 1.06
KCNA3P22001 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.69■■□□□ 1.06
KCNA3P22001 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KCNA3P22001 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.69■■□□□ 1.06
KCNA3P22001 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNA3P22001 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
KCNA3P22001 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
KCNA3P22001 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNA3P22001 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.68■■□□□ 1.06
KCNA3P22001 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 AC007274.1-201ENST00000439805 662 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 TSPY16P-201ENST00000449843 468 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 AC067863.1-201ENST00000494933 530 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.68■■□□□ 1.06
KCNA3P22001 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.68■■□□□ 1.06
KCNA3P22001 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
KCNA3P22001 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.68■■□□□ 1.06
KCNA3P22001 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
KCNA3P22001 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNA3P22001 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 AC018445.3-201ENST00000624177 1945 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 AC097637.2-201ENST00000624096 1997 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 ESPNP-201ENST00000270691 2015 ntBASIC21.68■■□□□ 1.06
KCNA3P22001 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNA3P22001 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
KCNA3P22001 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
KCNA3P22001 TFAMP1-201ENST00000412727 736 ntBASIC21.67■■□□□ 1.06
KCNA3P22001 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 TERF1P3-201ENST00000505638 1227 ntBASIC21.67■■□□□ 1.06
KCNA3P22001 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.67■■□□□ 1.06
KCNA3P22001 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNA3P22001 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNA3P22001 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KCNA3P22001 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNA3P22001 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNA3P22001 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNA3P22001 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNA3P22001 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.66■■□□□ 1.06
KCNA3P22001 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 DDX43P3-201ENST00000441064 443 ntBASIC21.66■■□□□ 1.06
KCNA3P22001 FAM185BP-201ENST00000443595 716 ntBASIC21.66■■□□□ 1.06
KCNA3P22001 MEIS3P1-201ENST00000495167 958 ntBASIC21.66■■□□□ 1.06
KCNA3P22001 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNA3P22001 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.66■■□□□ 1.06
KCNA3P22001 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNA3P22001 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNA3P22001 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.66■■□□□ 1.06
KCNA3P22001 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KCNA3P22001 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNA3P22001 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms