Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM21P19474 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM21P19474 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM21P19474 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM21P19474 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TRIM21P19474 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM21P19474 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM21P19474 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRIM21P19474 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM21P19474 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM21P19474 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM21P19474 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM21P19474 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM21P19474 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM21P19474 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM21P19474 AC106820.2-201ENST00000563775 3264 ntBASIC19.68■□□□□ 0.74
TRIM21P19474 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM21P19474 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM21P19474 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM21P19474 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM21P19474 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM21P19474 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 MIR1224-201ENST00000408193 85 ntBASIC19.67■□□□□ 0.74
TRIM21P19474 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM21P19474 RASA4DP-201ENST00000460726 1199 ntBASIC19.67■□□□□ 0.74
TRIM21P19474 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TRIM21P19474 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM21P19474 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM21P19474 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM21P19474 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM21P19474 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM21P19474 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM21P19474 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM21P19474 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM21P19474 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM21P19474 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM21P19474 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 SIRPAP1-201ENST00000448467 1770 ntBASIC19.66■□□□□ 0.74
TRIM21P19474 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM21P19474 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM21P19474 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM21P19474 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM21P19474 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM21P19474 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM21P19474 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM21P19474 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM21P19474 AC108860.2-201ENST00000562760 2183 ntBASIC19.66■□□□□ 0.74
TRIM21P19474 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms