Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC090616.6-201ENST00000582640 721 ntBASIC17.79■□□□□ 0.44
XRCC1P18887 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.79■□□□□ 0.44
XRCC1P18887 AC092119.3-201ENST00000612618 583 ntBASIC17.79■□□□□ 0.44
XRCC1P18887 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.79■□□□□ 0.44
XRCC1P18887 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
XRCC1P18887 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
XRCC1P18887 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.79■□□□□ 0.44
XRCC1P18887 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
XRCC1P18887 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.79■□□□□ 0.44
XRCC1P18887 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.79■□□□□ 0.44
XRCC1P18887 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC1P18887 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.78■□□□□ 0.44
XRCC1P18887 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.78■□□□□ 0.44
XRCC1P18887 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.78■□□□□ 0.44
XRCC1P18887 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 AC113404.2-201ENST00000507884 177 ntBASIC17.78■□□□□ 0.44
XRCC1P18887 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.78■□□□□ 0.44
XRCC1P18887 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.78■□□□□ 0.44
XRCC1P18887 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.78■□□□□ 0.44
XRCC1P18887 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 AP002414.4-201ENST00000589764 1148 ntBASIC17.78■□□□□ 0.44
XRCC1P18887 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 REXO1L9P-201ENST00000604264 2108 ntBASIC17.78■□□□□ 0.44
XRCC1P18887 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
XRCC1P18887 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC1P18887 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.78■□□□□ 0.44
XRCC1P18887 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
XRCC1P18887 KRT18P1-202ENST00000452408 1331 ntBASIC17.77■□□□□ 0.44
XRCC1P18887 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 HTR7P1-202ENST00000624664 4411 ntBASIC17.77■□□□□ 0.44
XRCC1P18887 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.77■□□□□ 0.44
XRCC1P18887 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC1P18887 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.77■□□□□ 0.44
XRCC1P18887 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.77■□□□□ 0.44
XRCC1P18887 DRAXINP1-201ENST00000437611 948 ntBASIC17.77■□□□□ 0.44
XRCC1P18887 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.77■□□□□ 0.44
XRCC1P18887 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.77■□□□□ 0.44
XRCC1P18887 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
XRCC1P18887 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.77■□□□□ 0.44
XRCC1P18887 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
XRCC1P18887 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
XRCC1P18887 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 HCG11-201ENST00000411553 5696 ntBASIC17.77■□□□□ 0.43
XRCC1P18887 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.77■□□□□ 0.43
XRCC1P18887 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
XRCC1P18887 AL353692.3-201ENST00000407031 1396 ntBASIC17.77■□□□□ 0.43
XRCC1P18887 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.77■□□□□ 0.43
XRCC1P18887 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC1P18887 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms