Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.53□□□□□ -0.08
DEFA4P12838 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.52□□□□□ -0.08
DEFA4P12838 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.52□□□□□ -0.08
DEFA4P12838 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DEFA4P12838 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
DEFA4P12838 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 AC092338.2-201ENST00000568827 1415 ntBASIC14.52□□□□□ -0.08
DEFA4P12838 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
DEFA4P12838 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DEFA4P12838 MMP23A-201ENST00000234610 1017 ntBASIC14.52□□□□□ -0.09
DEFA4P12838 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.52□□□□□ -0.09
DEFA4P12838 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.52□□□□□ -0.09
DEFA4P12838 AC007663.1-201ENST00000438948 1240 ntBASIC14.52□□□□□ -0.09
DEFA4P12838 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 EGLN1P1-201ENST00000531623 762 ntBASIC14.52□□□□□ -0.09
DEFA4P12838 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.52□□□□□ -0.09
DEFA4P12838 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.52□□□□□ -0.09
DEFA4P12838 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.52□□□□□ -0.09
DEFA4P12838 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
DEFA4P12838 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DEFA4P12838 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.52□□□□□ -0.09
DEFA4P12838 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.52□□□□□ -0.09
DEFA4P12838 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DEFA4P12838 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
DEFA4P12838 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 AC009102.3-201ENST00000623118 1491 ntBASIC14.51□□□□□ -0.09
DEFA4P12838 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 TSPY14P-201ENST00000303979 915 ntBASIC14.51□□□□□ -0.09
DEFA4P12838 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.51□□□□□ -0.09
DEFA4P12838 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
DEFA4P12838 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.51□□□□□ -0.09
DEFA4P12838 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.51□□□□□ -0.09
DEFA4P12838 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.51□□□□□ -0.09
DEFA4P12838 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 CR769767.2-201ENST00000622735 460 ntBASIC14.51□□□□□ -0.09
DEFA4P12838 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
DEFA4P12838 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
DEFA4P12838 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.51□□□□□ -0.09
DEFA4P12838 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
DEFA4P12838 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 AL163051.1-201ENST00000569214 1512 ntBASIC14.51□□□□□ -0.09
DEFA4P12838 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.51□□□□□ -0.09
DEFA4P12838 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DEFA4P12838 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DEFA4P12838 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEFA4P12838 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEFA4P12838 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEFA4P12838 HOXB1-202ENST00000577092 1414 ntBASIC14.5□□□□□ -0.09
DEFA4P12838 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
DEFA4P12838 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.5□□□□□ -0.09
DEFA4P12838 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.5□□□□□ -0.09
DEFA4P12838 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEFA4P12838 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
DEFA4P12838 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.5□□□□□ -0.09
DEFA4P12838 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.5□□□□□ -0.09
DEFA4P12838 SIRPAP1-201ENST00000448467 1770 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms