Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.8■□□□□ 0.6
KRT3P12035 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT3P12035 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT3P12035 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT3P12035 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT3P12035 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT3P12035 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT3P12035 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KRT3P12035 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KRT3P12035 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KRT3P12035 AC009949.1-201ENST00000623048 1830 ntBASIC18.79■□□□□ 0.6
KRT3P12035 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
KRT3P12035 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 MTCL1P1-201ENST00000446207 792 ntBASIC18.79■□□□□ 0.6
KRT3P12035 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT3P12035 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
KRT3P12035 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT3P12035 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.79■□□□□ 0.6
KRT3P12035 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT3P12035 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT3P12035 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT3P12035 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT3P12035 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
KRT3P12035 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT3P12035 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT3P12035 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
KRT3P12035 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT3P12035 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KRT3P12035 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT3P12035 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT3P12035 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT3P12035 AC011498.5-201ENST00000592027 486 ntBASIC18.78■□□□□ 0.6
KRT3P12035 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT3P12035 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.78■□□□□ 0.6
KRT3P12035 AL590326.2-201ENST00000625139 305 ntBASIC18.78■□□□□ 0.6
KRT3P12035 AL121956.5-201ENST00000625261 221 ntBASIC18.78■□□□□ 0.6
KRT3P12035 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT3P12035 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
KRT3P12035 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT3P12035 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT3P12035 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 TSPY22P-201ENST00000427496 604 ntBASIC18.77■□□□□ 0.6
KRT3P12035 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KRT3P12035 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT3P12035 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT3P12035 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT3P12035 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT3P12035 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KRT3P12035 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT3P12035 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT3P12035 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KRT3P12035 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT3P12035 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.77■□□□□ 0.59
KRT3P12035 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms