Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 HCG11-201ENST00000411553 5696 ntBASIC17.96■□□□□ 0.47
SRPRAP08240 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SRPRAP08240 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.96■□□□□ 0.47
SRPRAP08240 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.96■□□□□ 0.47
SRPRAP08240 NKAPP1-205ENST00000585790 367 ntBASIC17.96■□□□□ 0.47
SRPRAP08240 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.96■□□□□ 0.47
SRPRAP08240 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.96■□□□□ 0.47
SRPRAP08240 AC079776.2-201ENST00000641154 1609 ntBASIC17.96■□□□□ 0.47
SRPRAP08240 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.96■□□□□ 0.47
SRPRAP08240 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.96■□□□□ 0.47
SRPRAP08240 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.96■□□□□ 0.47
SRPRAP08240 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.96■□□□□ 0.47
SRPRAP08240 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRPRAP08240 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SRPRAP08240 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SRPRAP08240 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SRPRAP08240 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 AC100803.2-201ENST00000562459 1963 ntBASIC17.95■□□□□ 0.46
SRPRAP08240 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.95■□□□□ 0.46
SRPRAP08240 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SRPRAP08240 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.95■□□□□ 0.46
SRPRAP08240 AL022342.1-201ENST00000400363 863 ntBASIC17.95■□□□□ 0.46
SRPRAP08240 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.95■□□□□ 0.46
SRPRAP08240 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SRPRAP08240 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.95■□□□□ 0.46
SRPRAP08240 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.95■□□□□ 0.46
SRPRAP08240 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.95■□□□□ 0.46
SRPRAP08240 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.95■□□□□ 0.46
SRPRAP08240 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.95■□□□□ 0.46
SRPRAP08240 AC073592.4-201ENST00000623827 446 ntBASIC17.95■□□□□ 0.46
SRPRAP08240 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SRPRAP08240 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.95■□□□□ 0.46
SRPRAP08240 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.95■□□□□ 0.46
SRPRAP08240 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRPRAP08240 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.94■□□□□ 0.46
SRPRAP08240 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
SRPRAP08240 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 KRT18P55-202ENST00000578578 1546 ntBASIC17.94■□□□□ 0.46
SRPRAP08240 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SRPRAP08240 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.94■□□□□ 0.46
SRPRAP08240 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRPRAP08240 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.94■□□□□ 0.46
SRPRAP08240 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.94■□□□□ 0.46
SRPRAP08240 AL590627.1-203ENST00000421194 1026 ntBASIC17.94■□□□□ 0.46
SRPRAP08240 HNRNPDP1-201ENST00000439535 754 ntBASIC17.94■□□□□ 0.46
SRPRAP08240 FAM215A-202ENST00000632077 792 ntBASIC17.94■□□□□ 0.46
SRPRAP08240 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.94■□□□□ 0.46
SRPRAP08240 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 SIGLEC16-201ENST00000599858 1437 ntBASIC17.94■□□□□ 0.46
SRPRAP08240 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.94■□□□□ 0.46
SRPRAP08240 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SRPRAP08240 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.94■□□□□ 0.46
SRPRAP08240 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRPRAP08240 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRPRAP08240 AL353593.2-201ENST00000602529 1483 ntBASIC17.94■□□□□ 0.46
SRPRAP08240 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.94■□□□□ 0.46
SRPRAP08240 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SRPRAP08240 AP000997.3-201ENST00000623333 2250 ntBASIC17.93■□□□□ 0.46
SRPRAP08240 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SRPRAP08240 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.93■□□□□ 0.46
SRPRAP08240 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms