Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RETP07949 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.95■□□□□ 0.46
RETP07949 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RETP07949 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RETP07949 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.95■□□□□ 0.46
RETP07949 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.95■□□□□ 0.46
RETP07949 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.95■□□□□ 0.46
RETP07949 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
RETP07949 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.95■□□□□ 0.46
RETP07949 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.95■□□□□ 0.46
RETP07949 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.95■□□□□ 0.46
RETP07949 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RETP07949 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 AL138831.2-201ENST00000606564 490 ntBASIC17.95■□□□□ 0.46
RETP07949 AC107918.4-202ENST00000641623 219 ntBASIC17.95■□□□□ 0.46
RETP07949 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RETP07949 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RETP07949 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RETP07949 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.95■□□□□ 0.46
RETP07949 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RETP07949 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.95■□□□□ 0.46
RETP07949 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.94■□□□□ 0.46
RETP07949 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.94■□□□□ 0.46
RETP07949 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.94■□□□□ 0.46
RETP07949 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.94■□□□□ 0.46
RETP07949 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.94■□□□□ 0.46
RETP07949 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.94■□□□□ 0.46
RETP07949 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RETP07949 FAM8A3P-201ENST00000427218 844 ntBASIC17.94■□□□□ 0.46
RETP07949 AC244107.1-201ENST00000442033 332 ntBASIC17.94■□□□□ 0.46
RETP07949 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.94■□□□□ 0.46
RETP07949 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.94■□□□□ 0.46
RETP07949 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
RETP07949 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.94■□□□□ 0.46
RETP07949 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RETP07949 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
RETP07949 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RETP07949 NOC2LP2-201ENST00000407594 1944 ntBASIC17.94■□□□□ 0.46
RETP07949 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RETP07949 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RETP07949 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RETP07949 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
RETP07949 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.93■□□□□ 0.46
RETP07949 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
RETP07949 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.93■□□□□ 0.46
RETP07949 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.93■□□□□ 0.46
RETP07949 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 KRT8P50-201ENST00000562022 1438 ntBASIC17.93■□□□□ 0.46
RETP07949 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.93■□□□□ 0.46
RETP07949 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.93■□□□□ 0.46
RETP07949 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.93■□□□□ 0.46
RETP07949 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
RETP07949 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.93■□□□□ 0.46
RETP07949 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.93■□□□□ 0.46
RETP07949 AC005829.1-201ENST00000570002 483 ntBASIC17.93■□□□□ 0.46
RETP07949 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.93■□□□□ 0.46
RETP07949 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.93■□□□□ 0.46
RETP07949 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.93■□□□□ 0.46
RETP07949 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.93■□□□□ 0.46
RETP07949 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RETP07949 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RETP07949 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms