Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 SCARNA2-201ENST00000458748 420 ntBASIC16.67■□□□□ 0.26
PDGFAP04085 AC068472.1-201ENST00000474589 881 ntBASIC16.67■□□□□ 0.26
PDGFAP04085 KRT18P41-201ENST00000518924 1277 ntBASIC16.67■□□□□ 0.26
PDGFAP04085 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFAP04085 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.67■□□□□ 0.26
PDGFAP04085 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PDGFAP04085 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PDGFAP04085 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PDGFAP04085 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 AC112777.1-201ENST00000540175 1423 ntBASIC16.67■□□□□ 0.26
PDGFAP04085 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PDGFAP04085 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFAP04085 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDGFAP04085 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFAP04085 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFAP04085 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFAP04085 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFAP04085 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.66■□□□□ 0.26
PDGFAP04085 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 RBM17P3-201ENST00000417687 1192 ntBASIC16.66■□□□□ 0.26
PDGFAP04085 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFAP04085 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.66■□□□□ 0.26
PDGFAP04085 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.66■□□□□ 0.26
PDGFAP04085 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFAP04085 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFAP04085 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDGFAP04085 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFAP04085 AC068880.1-201ENST00000507289 2297 ntBASIC16.66■□□□□ 0.26
PDGFAP04085 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 AC124067.4-201ENST00000519691 2379 ntBASIC16.65■□□□□ 0.26
PDGFAP04085 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDGFAP04085 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDGFAP04085 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 PGAM5P1-201ENST00000518923 814 ntBASIC16.65■□□□□ 0.26
PDGFAP04085 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.65■□□□□ 0.26
PDGFAP04085 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.65■□□□□ 0.26
PDGFAP04085 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.65■□□□□ 0.26
PDGFAP04085 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.65■□□□□ 0.26
PDGFAP04085 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.65■□□□□ 0.26
PDGFAP04085 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.65■□□□□ 0.26
PDGFAP04085 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDGFAP04085 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFAP04085 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms