Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.97■□□□□ 0.79
GGPS1O95749 PMS2P1-201ENST00000431037 1228 ntBASIC19.97■□□□□ 0.79
GGPS1O95749 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 OR7E14P-202ENST00000530490 1290 ntBASIC19.97■□□□□ 0.79
GGPS1O95749 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.97■□□□□ 0.79
GGPS1O95749 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
GGPS1O95749 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
GGPS1O95749 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
GGPS1O95749 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.96■□□□□ 0.79
GGPS1O95749 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
GGPS1O95749 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.96■□□□□ 0.79
GGPS1O95749 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.96■□□□□ 0.79
GGPS1O95749 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 MTDHP4-201ENST00000600287 670 ntBASIC19.96■□□□□ 0.79
GGPS1O95749 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.96■□□□□ 0.79
GGPS1O95749 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.96■□□□□ 0.79
GGPS1O95749 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.96■□□□□ 0.79
GGPS1O95749 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GGPS1O95749 AL390961.4-201ENST00000623958 2535 ntBASIC19.96■□□□□ 0.79
GGPS1O95749 PMPCAP1-201ENST00000508114 1576 ntBASIC19.95■□□□□ 0.78
GGPS1O95749 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.95■□□□□ 0.78
GGPS1O95749 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.95■□□□□ 0.78
GGPS1O95749 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
GGPS1O95749 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
GGPS1O95749 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.95■□□□□ 0.78
GGPS1O95749 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.95■□□□□ 0.78
GGPS1O95749 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 RPL13AP23-201ENST00000480739 586 ntBASIC19.95■□□□□ 0.78
GGPS1O95749 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.95■□□□□ 0.78
GGPS1O95749 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.95■□□□□ 0.78
GGPS1O95749 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.95■□□□□ 0.78
GGPS1O95749 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.95■□□□□ 0.78
GGPS1O95749 AC106730.1-201ENST00000566722 1090 ntBASIC19.95■□□□□ 0.78
GGPS1O95749 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.95■□□□□ 0.78
GGPS1O95749 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.95■□□□□ 0.78
GGPS1O95749 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
GGPS1O95749 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GGPS1O95749 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GGPS1O95749 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
GGPS1O95749 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.94■□□□□ 0.78
GGPS1O95749 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GGPS1O95749 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
GGPS1O95749 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.94■□□□□ 0.78
GGPS1O95749 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GGPS1O95749 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.94■□□□□ 0.78
GGPS1O95749 BX005266.1-201ENST00000473402 457 ntBASIC19.94■□□□□ 0.78
GGPS1O95749 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.94■□□□□ 0.78
GGPS1O95749 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms