Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSPG5O95196 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
CSPG5O95196 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CSPG5O95196 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.12■□□□□ 0.65
CSPG5O95196 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.11■□□□□ 0.65
CSPG5O95196 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.11■□□□□ 0.65
CSPG5O95196 NEFHP1-201ENST00000412845 2629 ntBASIC19.11■□□□□ 0.65
CSPG5O95196 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.11■□□□□ 0.65
CSPG5O95196 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.11■□□□□ 0.65
CSPG5O95196 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 AC022898.2-201ENST00000616822 1312 ntBASIC19.11■□□□□ 0.65
CSPG5O95196 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
CSPG5O95196 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.11■□□□□ 0.65
CSPG5O95196 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.11■□□□□ 0.65
CSPG5O95196 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.11■□□□□ 0.65
CSPG5O95196 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSPG5O95196 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSPG5O95196 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CSPG5O95196 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG5O95196 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.1■□□□□ 0.65
CSPG5O95196 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CSPG5O95196 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 PKD1P1-201ENST00000458669 6805 ntBASIC19.1■□□□□ 0.65
CSPG5O95196 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 AC097374.2-201ENST00000618617 1306 ntBASIC19.1■□□□□ 0.65
CSPG5O95196 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CSPG5O95196 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.1■□□□□ 0.65
CSPG5O95196 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.1■□□□□ 0.65
CSPG5O95196 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.1■□□□□ 0.65
CSPG5O95196 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 AC002347.1-201ENST00000569543 541 ntBASIC19.1■□□□□ 0.65
CSPG5O95196 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.1■□□□□ 0.65
CSPG5O95196 AC107918.4-202ENST00000641623 219 ntBASIC19.1■□□□□ 0.65
CSPG5O95196 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CSPG5O95196 AC026471.1-201ENST00000564629 3026 ntBASIC19.1■□□□□ 0.65
CSPG5O95196 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSPG5O95196 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CSPG5O95196 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSPG5O95196 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CSPG5O95196 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CSPG5O95196 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CSPG5O95196 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSPG5O95196 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSPG5O95196 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.09■□□□□ 0.65
CSPG5O95196 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSPG5O95196 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms