Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 HLA-J-201ENST00000462773 1622 ntBASIC17.12■□□□□ 0.33
PRAMEF4O60810 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 AC005336.2-201ENST00000593183 939 ntBASIC17.12■□□□□ 0.33
PRAMEF4O60810 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 AC124864.1-201ENST00000623408 392 ntBASIC17.12■□□□□ 0.33
PRAMEF4O60810 AL590326.2-201ENST00000625139 305 ntBASIC17.12■□□□□ 0.33
PRAMEF4O60810 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF4O60810 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF4O60810 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 LTB4R2-202ENST00000528054 3092 ntBASIC17.11■□□□□ 0.33
PRAMEF4O60810 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF4O60810 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF4O60810 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF4O60810 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms