Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CEP290O15078 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CEP290O15078 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.13■□□□□ 0.65
CEP290O15078 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CEP290O15078 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
CEP290O15078 GNAS-203ENST00000306120 1878 ntBASIC19.13■□□□□ 0.65
CEP290O15078 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CEP290O15078 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 KRT17P7-201ENST00000451704 1104 ntBASIC19.13■□□□□ 0.65
CEP290O15078 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.13■□□□□ 0.65
CEP290O15078 AC092658.1-201ENST00000505836 891 ntBASIC19.13■□□□□ 0.65
CEP290O15078 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.13■□□□□ 0.65
CEP290O15078 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 AC132938.2-201ENST00000579188 680 ntBASIC19.13■□□□□ 0.65
CEP290O15078 AL591163.1-201ENST00000641757 987 ntBASIC19.13■□□□□ 0.65
CEP290O15078 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CEP290O15078 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CEP290O15078 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.12■□□□□ 0.65
CEP290O15078 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.12■□□□□ 0.65
CEP290O15078 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.12■□□□□ 0.65
CEP290O15078 GIMAP3P-201ENST00000495150 836 ntBASIC19.12■□□□□ 0.65
CEP290O15078 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.12■□□□□ 0.65
CEP290O15078 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.12■□□□□ 0.65
CEP290O15078 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.12■□□□□ 0.65
CEP290O15078 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CEP290O15078 AL049757.1-201ENST00000616842 1596 ntBASIC19.12■□□□□ 0.65
CEP290O15078 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CEP290O15078 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CEP290O15078 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.12■□□□□ 0.65
CEP290O15078 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CEP290O15078 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CEP290O15078 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CEP290O15078 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.11■□□□□ 0.65
CEP290O15078 FAM185BP-201ENST00000443595 716 ntBASIC19.11■□□□□ 0.65
CEP290O15078 MIR4538-201ENST00000581377 78 ntBASIC19.11■□□□□ 0.65
CEP290O15078 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CEP290O15078 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CEP290O15078 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.11■□□□□ 0.65
CEP290O15078 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CEP290O15078 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CEP290O15078 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CEP290O15078 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.11■□□□□ 0.65
CEP290O15078 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.11■□□□□ 0.65
CEP290O15078 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CEP290O15078 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.11■□□□□ 0.65
CEP290O15078 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.11■□□□□ 0.65
CEP290O15078 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CEP290O15078 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.11■□□□□ 0.65
CEP290O15078 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CEP290O15078 AKAP8P1-201ENST00000434743 1349 ntBASIC19.1■□□□□ 0.65
CEP290O15078 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CEP290O15078 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 AC002056.1-201ENST00000395613 760 ntBASIC19.1■□□□□ 0.65
CEP290O15078 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.1■□□□□ 0.65
CEP290O15078 TREML5P-201ENST00000421694 576 ntBASIC19.1■□□□□ 0.65
CEP290O15078 TP53TG3HP-202ENST00000569755 579 ntBASIC19.1■□□□□ 0.65
CEP290O15078 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.1■□□□□ 0.65
CEP290O15078 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 ACTL9-202ENST00000612068 1252 ntBASIC19.1■□□□□ 0.65
CEP290O15078 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CEP290O15078 FAM86C2P-203ENST00000528684 1004 ntBASIC19.1■□□□□ 0.65
CEP290O15078 AC243562.1-201ENST00000560672 389 ntBASIC19.1■□□□□ 0.65
CEP290O15078 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CEP290O15078 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CEP290O15078 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CEP290O15078 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CEP290O15078 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CEP290O15078 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CEP290O15078 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.09■□□□□ 0.65
CEP290O15078 LINC01006-201ENST00000333319 2292 ntBASIC19.09■□□□□ 0.65
CEP290O15078 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.09■□□□□ 0.65
CEP290O15078 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.09■□□□□ 0.65
CEP290O15078 AC092552.1-201ENST00000547243 906 ntBASIC19.09■□□□□ 0.65
CEP290O15078 AL162274.1-201ENST00000617191 1098 ntBASIC19.09■□□□□ 0.65
CEP290O15078 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms