Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KPNA4O00629 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KPNA4O00629 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KPNA4O00629 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
KPNA4O00629 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KPNA4O00629 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KPNA4O00629 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KPNA4O00629 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 SLC25A1P2-201ENST00000430693 912 ntBASIC16.71■□□□□ 0.27
KPNA4O00629 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.71■□□□□ 0.27
KPNA4O00629 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 CR769767.2-201ENST00000622735 460 ntBASIC16.71■□□□□ 0.27
KPNA4O00629 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.71■□□□□ 0.27
KPNA4O00629 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.71■□□□□ 0.27
KPNA4O00629 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KPNA4O00629 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KPNA4O00629 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
KPNA4O00629 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KPNA4O00629 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 PHGDH-209ENST00000641074 1780 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.7■□□□□ 0.26
KPNA4O00629 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.7■□□□□ 0.26
KPNA4O00629 CCR12P-201ENST00000446203 998 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 TSPY17P-201ENST00000450329 467 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.7■□□□□ 0.26
KPNA4O00629 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 AL353719.1-201ENST00000566847 864 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 AL023803.3-201ENST00000615559 522 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KPNA4O00629 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
KPNA4O00629 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 AL163051.1-201ENST00000569214 1512 ntBASIC16.7■□□□□ 0.26
KPNA4O00629 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KPNA4O00629 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KPNA4O00629 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KPNA4O00629 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KPNA4O00629 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KPNA4O00629 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
KPNA4O00629 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KPNA4O00629 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KPNA4O00629 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.69■□□□□ 0.26
KPNA4O00629 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KPNA4O00629 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.69■□□□□ 0.26
KPNA4O00629 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms