Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.59■□□□□ 0.25
CACNA1AO00555 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CACNA1AO00555 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.59■□□□□ 0.25
CACNA1AO00555 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNA1AO00555 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNA1AO00555 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CACNA1AO00555 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNA1AO00555 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CACNA1AO00555 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.59■□□□□ 0.25
CACNA1AO00555 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CACNA1AO00555 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.58■□□□□ 0.25
CACNA1AO00555 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.58■□□□□ 0.25
CACNA1AO00555 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.58■□□□□ 0.25
CACNA1AO00555 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.58■□□□□ 0.25
CACNA1AO00555 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
CACNA1AO00555 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.58■□□□□ 0.25
CACNA1AO00555 FEM1AP3-201ENST00000403722 1741 ntBASIC16.58■□□□□ 0.25
CACNA1AO00555 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.58■□□□□ 0.25
CACNA1AO00555 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CACNA1AO00555 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA1AO00555 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CACNA1AO00555 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.58■□□□□ 0.24
CACNA1AO00555 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.58■□□□□ 0.24
CACNA1AO00555 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.58■□□□□ 0.24
CACNA1AO00555 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CACNA1AO00555 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CACNA1AO00555 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.58■□□□□ 0.24
CACNA1AO00555 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.58■□□□□ 0.24
CACNA1AO00555 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CACNA1AO00555 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.58■□□□□ 0.24
CACNA1AO00555 AL138828.2-201ENST00000615812 383 ntBASIC16.58■□□□□ 0.24
CACNA1AO00555 MIR6080-201ENST00000617359 66 ntBASIC16.58■□□□□ 0.24
CACNA1AO00555 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA1AO00555 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.58■□□□□ 0.24
CACNA1AO00555 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CACNA1AO00555 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
CACNA1AO00555 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.57■□□□□ 0.24
CACNA1AO00555 RN7SL752P-201ENST00000463779 287 ntBASIC16.57■□□□□ 0.24
CACNA1AO00555 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 AC073592.8-201ENST00000624126 511 ntBASIC16.57■□□□□ 0.24
CACNA1AO00555 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 AC234644.1-201ENST00000406065 370 ntBASIC16.57■□□□□ 0.24
CACNA1AO00555 MIR663B-201ENST00000408361 115 ntBASIC16.57■□□□□ 0.24
CACNA1AO00555 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.57■□□□□ 0.24
CACNA1AO00555 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.57■□□□□ 0.24
CACNA1AO00555 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 RARRES2P8-201ENST00000566335 367 ntBASIC16.57■□□□□ 0.24
CACNA1AO00555 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.57■□□□□ 0.24
CACNA1AO00555 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.57■□□□□ 0.24
CACNA1AO00555 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA1AO00555 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA1AO00555 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA1AO00555 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CACNA1AO00555 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CACNA1AO00555 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CACNA1AO00555 TTTY23B-201ENST00000442790 549 ntBASIC16.56■□□□□ 0.24
CACNA1AO00555 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms