Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.07■□□□□ 0.16
CCRL2O00421 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.07■□□□□ 0.16
CCRL2O00421 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCRL2O00421 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCRL2O00421 AC008741.2-201ENST00000612792 3115 ntBASIC16.06■□□□□ 0.16
CCRL2O00421 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.06■□□□□ 0.16
CCRL2O00421 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.06■□□□□ 0.16
CCRL2O00421 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.06■□□□□ 0.16
CCRL2O00421 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.06■□□□□ 0.16
CCRL2O00421 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.06■□□□□ 0.16
CCRL2O00421 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.06■□□□□ 0.16
CCRL2O00421 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.06■□□□□ 0.16
CCRL2O00421 AC131212.4-201ENST00000623606 975 ntBASIC16.06■□□□□ 0.16
CCRL2O00421 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCRL2O00421 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CCRL2O00421 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.06■□□□□ 0.16
CCRL2O00421 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCRL2O00421 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCRL2O00421 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 LINC00304-203ENST00000565008 1864 ntBASIC16.05■□□□□ 0.16
CCRL2O00421 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 AL163051.1-201ENST00000569214 1512 ntBASIC16.05■□□□□ 0.16
CCRL2O00421 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.05■□□□□ 0.16
CCRL2O00421 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 RNA5SP413-201ENST00000516373 109 ntBASIC16.05■□□□□ 0.16
CCRL2O00421 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.05■□□□□ 0.16
CCRL2O00421 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.05■□□□□ 0.16
CCRL2O00421 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCRL2O00421 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.05■□□□□ 0.16
CCRL2O00421 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCRL2O00421 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCRL2O00421 HLA-J-201ENST00000462773 1622 ntBASIC16.05■□□□□ 0.16
CCRL2O00421 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCRL2O00421 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms