Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DFFAO00273 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DFFAO00273 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.35■□□□□ 0.53
DFFAO00273 SLC25A6P5-201ENST00000435663 894 ntBASIC18.35■□□□□ 0.53
DFFAO00273 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.35■□□□□ 0.53
DFFAO00273 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DFFAO00273 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.35■□□□□ 0.53
DFFAO00273 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFAO00273 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFAO00273 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFAO00273 AC134043.2-201ENST00000624206 2238 ntBASIC18.35■□□□□ 0.53
DFFAO00273 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFAO00273 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
DFFAO00273 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
DFFAO00273 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
DFFAO00273 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.35■□□□□ 0.53
DFFAO00273 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.34■□□□□ 0.53
DFFAO00273 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 KRT18P1-202ENST00000452408 1331 ntBASIC18.34■□□□□ 0.53
DFFAO00273 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.34■□□□□ 0.53
DFFAO00273 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.34■□□□□ 0.53
DFFAO00273 RN7SL606P-201ENST00000472779 293 ntBASIC18.34■□□□□ 0.53
DFFAO00273 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DFFAO00273 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.34■□□□□ 0.53
DFFAO00273 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 AC069148.1-201ENST00000608741 768 ntBASIC18.34■□□□□ 0.53
DFFAO00273 AC093458.2-201ENST00000623150 629 ntBASIC18.34■□□□□ 0.53
DFFAO00273 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.34■□□□□ 0.53
DFFAO00273 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DFFAO00273 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFAO00273 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DFFAO00273 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DFFAO00273 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFAO00273 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.33■□□□□ 0.53
DFFAO00273 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
DFFAO00273 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.33■□□□□ 0.53
DFFAO00273 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.33■□□□□ 0.53
DFFAO00273 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DFFAO00273 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFAO00273 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFAO00273 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFAO00273 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.33■□□□□ 0.52
DFFAO00273 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
DFFAO00273 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.33■□□□□ 0.52
DFFAO00273 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.33■□□□□ 0.52
DFFAO00273 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DFFAO00273 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
DFFAO00273 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.33■□□□□ 0.52
DFFAO00273 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.33■□□□□ 0.52
DFFAO00273 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DFFAO00273 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.33■□□□□ 0.52
DFFAO00273 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFAO00273 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.33■□□□□ 0.52
DFFAO00273 AC009949.1-201ENST00000623048 1830 ntBASIC18.33■□□□□ 0.52
DFFAO00273 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.32■□□□□ 0.52
DFFAO00273 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.32■□□□□ 0.52
DFFAO00273 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DFFAO00273 FZD10-202ENST00000539839 3282 ntBASIC18.32■□□□□ 0.52
DFFAO00273 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFAO00273 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DFFAO00273 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.32■□□□□ 0.52
DFFAO00273 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.32■□□□□ 0.52
DFFAO00273 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms