Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 PCDH8P1-201ENST00000428983 2773 ntBASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 MIR1238-201ENST00000408483 83 ntBASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 AGGF1P2-201ENST00000426656 2106 ntBASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC008550.1-201ENST00000511500 884 ntBASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 CROCCP2-202ENST00000412962 2773 ntBASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
TRBV6-7A0A0A0MS04 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC022898.2-201ENST00000616822 1312 ntBASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC100803.2-201ENST00000562459 1963 ntBASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 EGLN1P1-201ENST00000531623 762 ntBASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC133963.1-201ENST00000504166 1679 ntBASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-7A0A0A0MS04 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 DOC2GP-204ENST00000639052 2548 ntBASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms