Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 AC113404.2-201ENST00000507884 177 ntBASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 NUS1P2-201ENST00000417358 873 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 AC091607.1-201ENST00000490318 1060 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 AC004263.2-201ENST00000617183 678 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 BX640515.1-201ENST00000617215 977 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 HLA-A-201ENST00000376802 1334 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 MTMR9LP-203ENST00000426597 1545 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.36■□□□□ 0.37
PCDHGA3Q9Y5H0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 AF238378.1-201ENST00000526806 358 ntBASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA3Q9Y5H0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA3Q9Y5H0 MIR149-201ENST00000384879 89 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms