Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 AL158047.1-201ENST00000445918 881 ntBASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NIPSNAP3AQ9UFN0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 CCR12P-201ENST00000446203 998 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 DUTP2-201ENST00000519164 463 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 BX088651.1-201ENST00000540551 451 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AC233702.5-201ENST00000584107 538 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AC010240.3-201ENST00000607688 395 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AC133963.1-201ENST00000504166 1679 ntBASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NIPSNAP3AQ9UFN0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 AC132938.6-201ENST00000623828 1655 ntBASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 PRORSD1P-201ENST00000295112 541 ntBASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 UBE2SP1-201ENST00000450587 669 ntBASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 TSPY20P-201ENST00000450910 630 ntBASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.05■□□□□ 0.32
NIPSNAP3AQ9UFN0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms