Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 KRT18P22-201ENST00000402024 1347 ntBASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 AC084018.2-201ENST00000613093 2607 ntBASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 ECEL1P3-201ENST00000427961 737 ntBASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
THUMPD1Q9NXG2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 ECEL1P2-202ENST00000465689 757 ntBASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
THUMPD1Q9NXG2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
THUMPD1Q9NXG2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 LINC00167-201ENST00000530583 1419 ntBASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 KRT8P9-201ENST00000558927 1449 ntBASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD1Q9NXG2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms